Media Summary: Welcome back! Previously we ran both RNA-seq and bacterial genome assemblies step by step - but if we want to do it a couple ... Recorded 04 May 2023. Johannes Köster of the Universität Duisburg-Essen presents "Transparent, reproducible, and adaptable ... Details: Thursday, October 12, 12:00 - 1:00pm Presenter: Stacy Li, Sudmant Lab, University of California, Berkeley More at ...
C Scale Tutorial Snakemake - Detailed Analysis & Overview
Welcome back! Previously we ran both RNA-seq and bacterial genome assemblies step by step - but if we want to do it a couple ... Recorded 04 May 2023. Johannes Köster of the Universität Duisburg-Essen presents "Transparent, reproducible, and adaptable ... Details: Thursday, October 12, 12:00 - 1:00pm Presenter: Stacy Li, Sudmant Lab, University of California, Berkeley More at ... Ensuring reproducibility is crucial for a successful scientific data analysis. Data analyses usually entail the application of many scripts, notebooks, and command line tools to transform, filter, aggregate or ... From where and how to get data for your analysis, to where and how to treat the outputs, workflow managers can help you ...
The main motivation for this is to have a version controlled and containerised environment for engineering analysis (e.g. finite ... This workshop will introduce HPC users to the different tools available on Yale clusters to automate frequently used workflows in a ... In this Code Club, Pat shares how to visualize the structure of a Presented at GCCBOSC 2018 in Portland, see for details. Invited Talk of Johannes Köster at the virtual Conference on a FAIR Data Infrastructure for Materials Genomics (June 2020) ... Slurm is an open-source, fault-tolerant, and highly scalable cluster management and job scheduling system for large and small ...
